Sequence Viewer is a tool for viewing and comparing DNA sequences. Align DNA, RNA, protein, or DNA + protein sequences via a variety of pairwise and multiple sequence alignment algorithms, generate phylogenetic trees to predict evolutionary relationships, explore sequence tracks to view GC content, gap fraction, sequence logos, translation SnapGene Viewer is software that allows molecular biologists to create, browse, and share richly annotated DNA sequence files up to 1 GB in length. It supports a wide variety of data types, including array-based and next-generation sequence data, and genomic annotations. Sequence alignment CLC Sequence Viewer can align nucleotides and proteins using a progressive alignment algorithm (see Bioinformatics explained: Multiple alignments.. CLC Sequence Viewer allows multiple alignment of DNA, RNA, proteins and consensus sequence determination and management. Software. Artemis - a DNA sequence viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation. DNA Features Viewer (full documentation here) is a Python library to visualize DNA features, e.g.
The package includes general facilities for sequence and contig editing, restriction enzyme mapping, translation, and repeat identification. ; UGENE - a free and open source DNA and protein sequence viewer and annotation tool. Users can generate reverse complement, translate DNA to protein, open reading frame determination or process neighbor-joining and unweighted pair group method with arithmetic mean (UPGMA) phylogenies.
MicrobeBridge Software is a streamlined, desktop software solution that connects DNA sequences generated on Applied Biosystems Sanger sequencers with the Centers for Disease Control and Prevention (CDC)’s MicrobeNet™ database for bacterial identification using 16S rRNA gene sequencing … The sequences to display are stored in text files which Sequence Viewer opens and reads. Features Artemis: a DNA sequence viewer and annotation tool (Sanger Centre) SEQtools is a program package for routine handling and analysis of DNA and protein sequences. This chapter describes how to use the program to align sequences, and alignment algorithms in more general terms. Dna Features Viewer automatically produce simple and clear plots even for sequences … To open one of these text files this, start Sequence Viewer, go to the